Fixed: for anyone who comes across this issue where you reinstall windows on a dual boot system and lose the boot files on the unchanged/untouched system, try this:
Start>settings>update&security>recovery>advanced startup>restart now
Opens options window. Go to troubleshoot and start in command prompt mode.
Find the volume the windows install is on (note this may be different than stated when you click my computer, if so type in DISKPART then LIST DISK. Type Select disk <disk number> then type Detail Disk) .
Come out of DISKPART by typing exit. Type in: bcdboot Z:Windows (where Z is your volume letter)
Reboot - fixed.