Good point. In the Mobo manual the slots are numbered PCIe_x1_1, PCIe_x1_2, and PCIe_x1_3. The tuner card is currently in slot 1, but if moved to any other slot Windows dosen't even recognize it. I don't know if slot one NEEDS to be filled first or if there is something wrong with the Mobo, either way moving it isn't an option.
Replacing the video card... I just bought it... the tuner card my be a better option. I'll do some research into tuner cards that work with ATI video cards.