Right click each shortcut on your desktop and check properties for the true path. One will be in C:\users\"your username". The other is the duplicate... In win7 or win8 it would be allusers but win10 may put elsewhere.
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they are not duplicates one is a steam runtime leading to 1 of my partitions and the other is another version of the game's exe's in another partition. the problem is one of them dont show in desktop user folder. i'll show you another 1 of the other problem files since that may have been a bad example.
Never mind i found solution, you were right all of my icons that werent on desktop folder were located in public dekstop rather than in my user's desktop. My apologies i didn't consider it because as i said i only have 1 users.
This thread is now solved by just cutting shortcuts them from public desktop and placing. to my user's desktop.
Thanks guys this problem plagued me for about a year.